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81.
Bardgett RD Richter A Bol R Garnett MH Bäumler R Xu X Lopez-Capel E Manning DA Hobbs PJ Hartley IR Wanek W 《Biology letters》2007,3(5):487-490
When glaciers retreat they expose barren substrates that become colonized by organisms, beginning the process of primary succession. Recent studies reveal that heterotrophic microbial communities occur in newly exposed glacial substrates before autotrophic succession begins. This raises questions about how heterotrophic microbial communities function in the absence of carbon inputs from autotrophs. We measured patterns of soil organic matter development and changes in microbial community composition and carbon use along a 150-year chronosequence of a retreating glacier in the Austrian Alps. We found that soil microbial communities of recently deglaciated terrain differed markedly from those of later successional stages, being of lower biomass and higher abundance of bacteria relative to fungi. Moreover, we found that these initial microbial communities used ancient and recalcitrant carbon as an energy source, along with modern carbon. Only after more than 50 years of organic matter accumulation did the soil microbial community change to one supported primarily by modern carbon, most likely from recent plant production. Our findings suggest the existence of an initial stage of heterotrophic microbial community development that precedes autotrophic community assembly and is sustained, in part, by ancient carbon. 相似文献
82.
HANNE Salmenkari ANITA LAITINEN RICHARD A. FORSGÅRD MERVI HOLAPPA JERE LINDÉN LAURI PASANEN MATTI KORHONEN RIITTA KORPELA JOHANNA NYSTEDT 《Cytotherapy》2019,21(2):175-188
Background
Mesenchymal stromal cells (MSCs) are a promising candidate for treatment of inflammatory disorders, but their efficacy in human inflammatory bowel diseases (IBDs) has been inconsistent. Comparing the results from various pre-clinical and clinical IBD studies is also challenging due to a large variation in study designs.Methods
In this comparative pre-clinical study, we compared two administration routes and investigated the safety and feasibility of both fresh and cryopreserved platelet-lysate–expanded human bone marrow–derived MSCs without additional licensing in a dextran sodium sulfate (DSS) colitis mouse model both in the acute and regenerative phases of colitis. Body weight, macroscopic score for inflammation and colonic interleukin (IL)-1β and tumor necrosis factor (TNF)α concentrations were determined in both phases of colitis. Additionally, histopathology was assessed and Il-1β and Agtr1a messenger RNA (mRNA) levels and angiotensin-converting enzyme (ACE) protein levels were measured in the colon in the regenerative phase of colitis.Results
Intravenously administered MSCs exhibited modest anti-inflammatory capacity in the acute phase of colitis by reducing IL-1β protein levels in the inflamed colon. There were no clear improvements in mice treated with fresh or cryopreserved unlicensed MSCs according to weight monitoring results, histopathology and macroscopic score results. Pro-inflammatory ACE protein expression and shedding were reduced by cryopreserved MSCs in the colon.Conclusions
In conclusion, we observed a good safety profile for bone marrow–derived platelet lysate–expanded MSCs in a mouse pre-clinical colitis model, but the therapeutic effect of MSCs prepared without additional licensing (i.e. such as MSCs are administered in graft-versus-host disease) was modest in the chosen in vivo model system and limited to biochemical improvements in cytokines without a clear benefit in histopathology or body weight development. 相似文献83.
Andrew T. Nottingham Jeanette Whitaker Nick J. Ostle Richard D. Bardgett Niall P. McNamara Noah Fierer Norma Salinas Adan J. Q. Ccahuana Benjamin L. Turner Patrick Meir 《Ecology letters》2019,22(11):1889-1899
Tropical soils contain huge carbon stocks, which climate warming is projected to reduce by stimulating organic matter decomposition, creating a positive feedback that will promote further warming. Models predict that the loss of carbon from warming soils will be mediated by microbial physiology, but no empirical data are available on the response of soil carbon and microbial physiology to warming in tropical forests, which dominate the terrestrial carbon cycle. Here we show that warming caused a considerable loss of soil carbon that was enhanced by associated changes in microbial physiology. By translocating soils across a 3000 m elevation gradient in tropical forest, equivalent to a temperature change of ± 15 °C, we found that soil carbon declined over 5 years by 4% in response to each 1 °C increase in temperature. The total loss of carbon was related to its original quantity and lability, and was enhanced by changes in microbial physiology including increased microbial carbon‐use‐efficiency, shifts in community composition towards microbial taxa associated with warmer temperatures, and increased activity of hydrolytic enzymes. These findings suggest that microbial feedbacks will cause considerable loss of carbon from tropical forest soils in response to predicted climatic warming this century. 相似文献
84.
TE Willnow C Antignac AW Br?ndli EI Christensen RD Cox D Davidson JA Davies O Devuyst G Eichele ND Hastie PJ Verroust A Schedl IC Meij 《Organogenesis》2005,2(2):42-47
Rapid progress in genome research creates a wealth of information on the functional annotation of mammalian genome sequences. However, as we accumulate large amounts of scientific information we are facing problems of how to integrate and relate the data produced by various genomic approaches. Here, we propose the novel concept of an organ atlas where diverse data from expression maps to histological findings to mutant phenotypes can be queried, compared and visualized in the context of a three-dimensional reconstruction of the organ. We will seek proof of concept for the organ atlas by elucidating genetic pathways involved in development and pathophysiology of the kidney. Such a kidney atlas may provide a paradigm for a new systems-biology approach in functional genome research aimed at understanding the genetic bases of organ development, physiology and disease.Key Words: EuReGene, kidney, genome, development, pathophysiology, genetics 相似文献
85.
Ellen L. Fry Amy L. Evans Craig J. Sturrock James M. Bullock Richard D. Bardgett 《Plant and Soil》2018,425(1-2):189-200
Aims
Fine root morphological traits are generally changed under soil nitrogen (N) enrichment, however, the underlying mechanism and functional significance are still not well understood. Our aims were to investigate the linkage of root morphology to anatomy, and its implication for root function at elevated soil N availability.Methods
Ingrowth cores were used to sample root tips (0–20 cm soil depth) from six temperate tree species growing in monoculture plantations at a common site in northeastern China. Root morphological and anatomical traits were concurrently measured, and their relationships were determined within and among species in both control and N fertilization (10 g N m?2y?1) plots.Results
Root diameter generally increased in all six species (non-significant for Phellodendron amurense) following N fertilization, which was caused by the increased root stele radius rather than cortical thickness. Congruently, N fertilization significantly decreased the ratio of cortical thickness to stele radius, but increased the ratio of total cross-sectional area of conduits to stele area in root tips across all species.Conclusions
The observed anatomical changes of root tips contributed to the alternations of morphological root traits following N fertilization, with potentially important impacts on root physiological functions, like increased water and nutrient transport.86.
Plant diversity and root traits benefit physical properties key to soil function in grasslands 总被引:3,自引:0,他引:3 下载免费PDF全文
Iain J. Gould John N. Quinton Alexandra Weigelt Gerlinde B. De Deyn Richard D. Bardgett 《Ecology letters》2016,19(9):1140-1149
Plant diversity loss impairs ecosystem functioning, including important effects on soil. Most studies that have explored plant diversity effects belowground, however, have largely focused on biological processes. As such, our understanding of how plant diversity impacts the soil physical environment remains limited, despite the fundamental role soil physical structure plays in ensuring soil function and ecosystem service provision. Here, in both a glasshouse and a long‐term field study, we show that high plant diversity in grassland systems increases soil aggregate stability, a vital structural property of soil, and that root traits play a major role in determining diversity effects. We also reveal that the presence of particular plant species within mixed communities affects an even wider range of soil physical processes, including hydrology and soil strength regimes. Our results indicate that alongside well‐documented effects on ecosystem functioning, plant diversity and root traits also benefit essential soil physical properties. 相似文献
87.
Plant and soil microbial responses to defoliation in temperate semi-natural grassland 总被引:2,自引:1,他引:1
There is much interest in understanding the nature of feedback mechanisms between plants and soil organisms in grazed ecosystems.
In this study, we examine the effects of different intensities of defoliation on the growth of three dominant grass species,
and observe how these plant responses relate to the biomass and activity of the microbial community in the root zone. Our
data show that grassland plants with varying tolerances to grazing have markedly different growth responses to defoliation,
and that these responses vary with the intensity of cutting. Defoliation of grasses which are tolerant to grazing, namely
Festuca rubra and Cynosurus cristatus, leads to a reduction in root mass and an increase in the allocation of resources to shoots. In contrast, defoliation of
a grass with low tolerance to grazing, Anthoxanthum odoratum, had little effect on root mass, but increased the relative allocation of resources below-ground. In all plant species, defoliation
led to an increase in soil microbial biomass and C use efficiency in the root zone. This response was greatest in the root
zone of A. odoratum and is likely to be related to changes in root exudation pattern following defoliation. The significance of these changes
in relation to soil nutrient dynamics and plant nutrient uptake during regrowth require further exploration.
This revised version was published online in June 2006 with corrections to the Cover Date. 相似文献
88.
89.
In the arms race between avian brood parasites and their hosts, several adaptations and counter‐adaptations have evolved. The most prominent host defence is rejection of parasitic eggs. We experimentally parasitized nests of 10 potential host species breeding in sympatry with four different cuckoo species in an area in Bangladesh using differently coloured model eggs to test host responses. In four species we introduced both mimetic and non‐mimetic eggs. Black Drongos Dicrurus macrocercus, hosts of the Indian Cuckoo Cuculus micropterus, rejected all model eggs. Common Mynas Acridotheres tristis and Jungle Babblers Turdoides striata accepted all eggs regardless of mimicry. These two species are parasitized by Asian Koels Eudynamys scolopaceus, Common Hawk‐cuckoo Hierococcyx varius and, in the case of Jungle Babblers, Jacobin Cuckoos Clamator jacobinus. Pied Mynas Gracupica contra, with no records of parasitism in our study area, also accepted all eggs regardless of mimicry. In the six remaining species, all of which lay spotted eggs, we introduced only non‐mimetic eggs. Black‐hooded Orioles Oriolus xanthornus rejected all model eggs, even though we have found no records of natural parasitism. Long‐tailed Shrikes Lanius schach and House Crows Corvus splendens, hosts of Asian Koels, rejected 75 and 9.1% of model eggs, respectively. Large‐billed Crows Corvus macrorhynchos, apparently not used as hosts in our study area, accepted all blue but rejected all brown model eggs. Oriental Magpie‐Robins Copsychus saularis and Red‐vented Bulbuls Pycnonotus cafer accepted all non‐mimetic model eggs. In Black Drongos, Long‐tailed Shrikes and Black‐hooded Orioles, all model eggs were ejected within 24 h of introduction. The results show considerable variation in egg rejection rates among various species, providing baseline data for further investigation of co‐evolutionary interactions between brood parasites and hosts in this region. 相似文献
90.